Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913162.1_cds_XP_016463224.1_56364
CDS Infomation

[gene=LOC107786284] [db_xref=GeneID:107786284] [protein=pentatricopeptide repeat-containing protein At3g53170-like isoform X2] [protein_id=XP_016463224.1] [location=complement(join(137310..137335,137608..138694,139673..140005))] [gbkey=CDS]
Sequence

ATGCAGTGTGCTATGGAGCTTCAATTGTCTTCCACTTTCCTCTCATCCTCCACCTCCAGC
CCCTATTTGATGATAGTCCCCAAAGAACATATAAACCAACAAAAAGCACAATTTTTGAGT
ATTAAATCATCAAGTTTAATTCCAGAAAGCACTTCGGGAGGCCTGCAAAAAAGTTCAAAG
AAAGACCTGTCTCGTTTACTGAGAACAGAAGCTGCTATTATAGGTATCGAGAGGAAAGCC
AACTCTCAGAAATACACTAACCTTTGGCCCAAAGCTGTTTTGGAGGCTCTCGATGATTCT
ATTAAACAAAACCGTTGGGACTCTGCTCTTAAGATTTTTGGCCTTCTTCGCAAGCAACAT
TGGTATGAGCCAAGATGCCACACATATGCTAAGCTTTTGGTAATGCTCGGCAAGTGCAAG
CAGCCAAATCAAGCTAGCTTGCTTTTTGAGATCATGCTAGCCGATGGGCTTCAACCAACA
CTAGATGTTTACACTGCACTTGTTAGTGCATATGGCCTTAGTGGCCTCCTTGATGAGGCG
CTGCACACCATTGATGATATGAAATCAGTTAGTAATTGCAAGCCCGATGTGTATACTTAC
TCAATCCTTATTAAGTGCTGCACTAAATTTCGTCGTTTTGATATGATTGAATATATTTTA
GCCGAGATGGCATATTTGGGAATTGAATGTACTTCTGTGACTTACAATACCTTAATTGAC
GGCTATGGTAAAGCTAAGCTGTTTGAGCTGATGGAAAGCTCCTTGTCAGATATGATCGAA
AGTGAGACTGCCTCTCCAGATGTTTTCACCTTGAATTCAGTAATTGGGTCCTATGGTAGC
TGTGGGAAACTTGAGATAATGGAGAAATGGTTTGAAAAATTTCAGGTAATGGGAATAAAG
CCAGATGTTATGACATTTAACATTCTAATCAAGTCATATGGAAGAGCTGGCATGTATCAG
AAAATGGAGTCTGTACTTGATTTTATGAGGAACCGGTTCTATTCCCCAACAGTTGTGACA
TACAATATTATCATTGAGATATTTGGGAAGGCTGGACTTATTATGAACATGGAAGAGTTT
TTCCTACAGATGAAGCACCAAGGAGTGAAGCCAACCTCATTCACTTATTGCTCTCTTGTC
AGTGCTTATGGTAGAGCTGGACTTCTCGAAAGAGTTGATTCAATCATGAGGCAAGTAGAG
AATTCGGACGTAGTTCTGGATACTCCTTTTTTCAATTGCATCATTAGTGCTTATGGTCAA
GCTGGTGATATAGAGAGGATGGTGGCATTATTCTTGGAAATGAAGGTCAGAAAATGTAAA
CCAGACTACATCACATTTTCTACTATGATCCAGGCCTACAATTCACAAGGAATGATCGAA
GCTGCCAATGACTTGAAGAGTAAAATGATTACTGCTTGTGAATCAAATGAAATGATCAGA
AGCTAG

Peptide Sequence

PEP ID

XP_016463224.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g53170-like isoform X2 [Nicotiana tabacum]
Sequence

MQCAMELQLSSTFLSSSTSSPYLMIVPKEHINQQKAQFLSIKSSSLIPESTSGGLQKSSK
KDLSRLLRTEAAIIGIERKANSQKYTNLWPKAVLEALDDSIKQNRWDSALKIFGLLRKQH
WYEPRCHTYAKLLVMLGKCKQPNQASLLFEIMLADGLQPTLDVYTALVSAYGLSGLLDEA
LHTIDDMKSVSNCKPDVYTYSILIKCCTKFRRFDMIEYILAEMAYLGIECTSVTYNTLID
GYGKAKLFELMESSLSDMIESETASPDVFTLNSVIGSYGSCGKLEIMEKWFEKFQVMGIK
PDVMTFNILIKSYGRAGMYQKMESVLDFMRNRFYSPTVVTYNIIIEIFGKAGLIMNMEEF
FLQMKHQGVKPTSFTYCSLVSAYGRAGLLERVDSIMRQVENSDVVLDTPFFNCIISAYGQ
AGDIERMVALFLEMKVRKCKPDYITFSTMIQAYNSQGMIEAANDLKSKMITACESNEMIR
S

Transcript Sequence

Gene sequence data has not been registered.